Francois leaves the Cottagers in a permanent deal.
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Wigan announced: "Wigan Athletic are delighted to announce the signing of midfielder Tyrese Francois on a two-year contract, subject to EFL and FA approval.
"Shaun Maloney has strengthened his first team ahead of the 2024/25 Sky Bet League One season, with Francois adding further quality to the Latics midfield."
Francois leaves Fulham after 10 years with the club.