The FA's general secretary Alex Horne says England may boycott any future matches against Serbia after this week's disgraceful scenes.
The FA have sent UEFA a full dossier of evidence, including video footage and a catalogue of incidents which they reported to match officials during and after the match.
Horne said in a statement: "We were shocked and appalled by the disgraceful events that occurred in Serbia last night.
"Our players and staff were subjected to racial abuse, violence as well as missiles being thrown at them throughout the match. What occurred is inexcusable and not acceptable.
"We call on UEFA to take the strongest possible action against the Serbian FA, their supporters and anyone found guilty of being involved in the numerous instances of violence and abuse.
"We have also been in contact with UEFA's senior executives to express our deep concern at this matter.
"It is also clear that we must defend Danny Rose, who was sent off due to the frustration of being a target of racial abuse.
"FA officials made UEFA officials aware of racist abuse from sections of the crowd aimed at a number of England's black players at half-time on Tuesday evening.
"This matter was discussed again during a meeting with UEFA after those disgraceful scenes which followed the final whistle.
"No football team should be asked to play in any environment where racial abuse, violence and threatening behaviour is prevalent. We must question the validity of sending a team to Serbia in the future."